Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937333.1_cds_XP_016482643.1_73851
CDS Infomation

[gene=LOC107803439] [db_xref=GeneID:107803439] [protein=probable protein phosphatase 2C 55] [protein_id=XP_016482643.1] [location=join(57791..58548,60096..60420,61079..61228,62087..62377,62929..62958)] [gbkey=CDS]
Sequence

ATGCAGAGTAATTATCTTTTTAGACTAGGTGGTGCAGTGAGGCAGGGAATCAAGAAATCC
ATATCTGGGCAAGAAAGTAGGCTCCAAGATTTGGTGGAGATTTTGGTCGCAGAAGAGAGA
TTGTTGTTCGGGAAATTCTTCTGTTCTGTGCCATCTGCAAGATTGTCTGACCTGCATGTG
ATTGTACGGCCTGGAACTTTAGCGGCTGCACAGGCAAATTTGAATATAGTTAATCAGAGG
AAGAATTTTTCAGTGGTCGGTGCTATTCCTCGTGCATTGTCTATACCATCTGTCTCAGGG
CATGCATTTCAGTTCTGTGGCTATCACATTGATCGCCTATTATCTGAGCCTACTCAAGTT
TCTATAGAGACTGACTCTCATAAAGCTCCTATGGCCATTTGTGGTTCAAGAACTTCTGTT
GGCTGTTCCTCGAGTAAAATGACTTCAAGGCATCTCAAACCTTGCCTTTTAGTAAATAGT
CCGATTACTATGTATAACAATAGAAATTTCGACAATTCTCAAAAAGCCAGCATGAGAGTG
AGGAATAACAATCAGCCCAACAACTTTGTTGTCTATGGATATTTCACATACAATGCTGTA
CAGAGCAAGGGCAATTCAAATGTTTATGAAGGATTTGGATTCAAGGGTTTTCATAGTTCT
TCAGCTGCATGTATCTCTGCTGGCGCTGCTCCTGATGTGTCCTTTGATAACTCTCTGCGT
GAGGTACACCCTGCAAGTTCAGCAAATTCTCCTGAACAAAATATCCATATCGATCGAAGC
CTGAAGCTTAATTCAGGGTCATGTTACCTGCCTCATCCTGATAAAGAAGAAAAAGGTGGC
GAGGACGCTCATTTTATTTGCATCGATGAACAAGTAATTGGTGTAGCTGATGGTGTTGGT
GGATGGGCTGATCTTGGTGTTGATGCTGGGCAATACGCCCGAGAACTCATGTCAAACGCA
GTAAGTGCAATTTGCGAGGAACCAAAAGGTTCAGTAGATCCAGCCAGGGTCCTGGAGAAA
GCTTATATACACACAAAAGCCAAAGGGTCCTCAACTGCCTGTATTATTGCCCTTACAGAT
GAGGGTCTCCATGCCATTAATTTAGGAGATAGCGGATTCCTGGTGGTTAGAGATGGATGT
ACTGTTTTCAGATCCCCCGTGCAGCAGCATGATTTCAATTTTACATTTCAGCTAGAGAGT
GGTAGTGCTGGTGACTTACCAAGCTCTGGGGAGGTGTATAAAATACCAGTTGCTCCAGGA
GATGTCATCATAGCTGGCACTGATGGGTTGTTTGACAATTTGTATAACAGCGATATAACT
GCAATCGTGGTGCATGCCACGAGAGCTGGCTTAGCACCTCAGGTTACAGCTCAGAAGATA
GCCGCATTGGCTCGACAAAGGGCACAGGACAAAAACAGGCAAACTCCTTTCTCTGCTGCA
GCTCAAGAAGCTGGCTTCCGTTACTATGGTGGGAAGTTGGACGACATAACTGTGGTTGTG
TCTTACATAACCAGTGACAAAAATGAAAGCTCCAACAGGTTGAAGATTAGTTAA

Peptide Sequence

PEP ID

XP_016482643.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 55 [Nicotiana tabacum]
Sequence

MQSNYLFRLGGAVRQGIKKSISGQESRLQDLVEILVAEERLLFGKFFCSVPSARLSDLHV
IVRPGTLAAAQANLNIVNQRKNFSVVGAIPRALSIPSVSGHAFQFCGYHIDRLLSEPTQV
SIETDSHKAPMAICGSRTSVGCSSSKMTSRHLKPCLLVNSPITMYNNRNFDNSQKASMRV
RNNNQPNNFVVYGYFTYNAVQSKGNSNVYEGFGFKGFHSSSAACISAGAAPDVSFDNSLR
EVHPASSANSPEQNIHIDRSLKLNSGSCYLPHPDKEEKGGEDAHFICIDEQVIGVADGVG
GWADLGVDAGQYARELMSNAVSAICEEPKGSVDPARVLEKAYIHTKAKGSSTACIIALTD
EGLHAINLGDSGFLVVRDGCTVFRSPVQQHDFNFTFQLESGSAGDLPSSGEVYKIPVAPG
DVIIAGTDGLFDNLYNSDITAIVVHATRAGLAPQVTAQKIAALARQRAQDKNRQTPFSAA
AQEAGFRYYGGKLDDITVVVSYITSDKNESSNRLKIS

Transcript Sequence

Gene sequence data has not been registered.